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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11893863 chr2:230303272 A/T MYEOV2 chr2:241065980-241076224:- -0.63 -6.39 4.89E-10 Box Plot
BLCA rs11900528 chr2:223608376 A/G RPL13AP3 chr14:56232895-56234435:+ 0.32 5.95 5.95E-9 Box Plot
BLCA rs11900528 chr2:223608376 A/G RPL19P12 chr7:102781796-102782386:- 0.36 6.05 3.38E-9 Box Plot
BLCA rs11901925 chr2:236928709 A/C AGFG1 chr2:228336868-228425930:+ 0.56 6.97 1.43E-11 Box Plot
BLCA rs11901925 chr2:236928709 A/C CAPN10 chr2:241526133-241557122:+ 0.52 6.31 7.79E-10 Box Plot
BLCA rs11901925 chr2:236928709 A/C COPS7B chr2:232646381-232673964:+ 0.68 6.38 5.05E-10 Box Plot
BLCA rs11901925 chr2:236928709 A/C COPS8 chr2:237993955-238009109:+ 0.62 7.37 1.08E-12 Box Plot
BLCA rs11901925 chr2:236928709 A/C CTDSP1 chr2:219262979-219270664:+ 0.55 6.2 1.47E-9 Box Plot
BLCA rs11901925 chr2:236928709 A/C CUL3 chr2:225334867-225450114:- 0.67 6.56 1.77E-10 Box Plot
BLCA rs11901925 chr2:236928709 A/C DIS3L2 chr2:232825955-233209060:+ 0.7 7.27 2.1E-12 Box Plot
BLCA rs11901925 chr2:236928709 A/C DUSP28 chr2:241499471-241503431:+ 0.5 6.33 6.88E-10 Box Plot
BLCA rs11901925 chr2:236928709 A/C EIF4E2 chr2:233414762-233448354:+ 0.71 7.96 1.93E-14 Box Plot
BLCA rs11901925 chr2:236928709 A/C GIGYF2 chr2:233562009-233725285:+ 0.68 8.13 5.85E-15 Box Plot
BLCA rs11901925 chr2:236928709 A/C HDLBP chr2:242166679-242256476:- 0.58 6.34 6.63E-10 Box Plot
BLCA rs11901925 chr2:236928709 A/C ILKAP chr2:239079042-239112370:- 0.67 7.42 7.44E-13 Box Plot